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CC1G_06604 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06604" - Uncharacterized protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06604Uncharacterized protein (730 aa)    
Predicted Functional Partners:
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (448 aa)
     
        0.690
CC1G_03596
WD repeat-containing protein (937 aa)
     
        0.683
CC1G_04441
U3 small nucleolar RNA-associated protein 4 (991 aa)
     
        0.680
CC1G_11396
Nucleolar protein NOP58 (569 aa)
     
        0.631
CC1G_01723
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.616
CC1G_03766
Uncharacterized protein (767 aa)
     
        0.610
CC1G_10586
ATP-dependent RNA helicase HAS1 (640 aa)
     
        0.601
CC1G_11505
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family (455 aa)
     
        0.595
CC1G_09123
Rpa49 subunit specific to nuclear RNA polymerase I (435 aa)
     
        0.569
CC1G_03215
Ribosome biogenesis protein tsr1 (789 aa)
     
        0.566
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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