STRINGSTRING
CC1G_06606 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06606" - Transcription regulatory protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06606Transcription regulatory protein (1374 aa)    
Predicted Functional Partners:
CC1G_11066
Uncharacterized protein (774 aa)
     
 
  0.861
CC1G_10654
Histone deacetylase RPD3 (557 aa)
     
 
  0.829
CC1G_04427
Histone deacetylase Hda1 (590 aa)
     
 
  0.829
CC1G_00894
Serine/threonine-protein kinase TOR; atypical/PIKK/FRAP protein kinase (2380 aa)
     
    0.828
CC1G_05319
Sin3b (1588 aa)
     
 
 
0.802
CC1G_04557
Small nuclear ribonucleoprotein Sm D3 (126 aa)
         
    0.800
CC1G_13998
Histone deacetylase-3; Belongs to the histone deacetylase family. HD Type 1 subfamily (504 aa)
     
 
  0.796
CC1G_05187
Uncharacterized protein (853 aa)
     
 
  0.791
CC1G_02678
Uncharacterized protein (380 aa)
     
 
  0.783
CC1G_03225
Histone acetyltransferase NGF-1 (629 aa)
     
 
  0.771
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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