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CC1G_00480 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00480" - Cytoplasmic protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00480Cytoplasmic protein (555 aa)    
Predicted Functional Partners:
CC1G_03215
Ribosome biogenesis protein tsr1 (789 aa)
     
 
  0.997
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
 
  0.996
CC1G_01287
Cell adhesion protein byn-1 (456 aa)
     
 
  0.994
CC1G_14285
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (672 aa)
     
   
  0.989
CC1G_14965
Uncharacterized protein (422 aa)
     
   
  0.987
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (611 aa)
     
   
  0.987
CC1G_13891
RNA-binding protein pno1 (477 aa)
     
 
  0.987
CC1G_09858
ATP-dependent RNA helicase dbp-4 (816 aa)
     
      0.986
CC1G_05311
Protein MAK16; 66S preribosome component MAK16; Belongs to the MAK16 family (319 aa)
     
        0.986
CC1G_13652
atypical/RIO/RIO2 protein kinase (472 aa)
     
 
  0.985
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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