STRINGSTRING
CC1G_00481 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00481" - TATA-binding protein associated factor Taf2 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00481TATA-binding protein associated factor Taf2 (1794 aa)    
Predicted Functional Partners:
CC1G_13701
atypical/TAF1 protein kinase (1054 aa)
     
 
  0.999
CC1G_01188
Transcription initiation factor tfiid 55 kDa subunit (405 aa)
     
 
  0.999
CC1G_10527
TFIID and SAGA subunit (786 aa)
     
 
  0.999
CC1G_01441
Uncharacterized protein (375 aa)
     
 
  0.999
CC1G_15044
Transcription initiation factor TFIID complex 60 kDa subunit (485 aa)
     
 
  0.999
CC1G_11509
Transcription initiation factor TFIID-1 (308 aa)
     
 
  0.999
CC1G_12056
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (180 aa)
       
 
  0.999
CC1G_04767
TAF11 (198 aa)
     
 
  0.995
CC1G_08827
Uncharacterized protein (536 aa)
     
 
  0.965
CC1G_01271
Transcription initiation factor TFIID subunit 9 (222 aa)
     
 
  0.960
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (8%) [HD]