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CC1G_00495 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00495" - GTP-binding protein RAB5 in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00495GTP-binding protein RAB5 (206 aa)    
Predicted Functional Partners:
CC1G_06302
atypical/PIKK/PI3K protein kinase; Belongs to the PI3/PI4-kinase family (852 aa)
     
  0.933
CC1G_14820
Guanine nucleotide exchange factor Vps9 (841 aa)
     
 
  0.929
CC1G_03651
GTP-binding protein ypt5 (257 aa)
   
0.887
CC1G_01740
RAB GDP-dissociation inhibitor; Belongs to the Rab GDI family (449 aa)
     
 
  0.879
CC1G_10201
Vacuolar membrane protein (1133 aa)
       
 
  0.862
CC1G_10063
Rab guanyl-nucleotide exchange factor (819 aa)
     
 
  0.862
CC1G_06865
Lateendosome to vacuole transport-family protein (1358 aa)
       
 
  0.861
CC1G_01727
DigA protein (1116 aa)
       
 
  0.861
CC1G_03547
Vacuolar protein sorting 16 isoform 1 (847 aa)
       
 
  0.859
CC1G_06618
ATP binding protein; Belongs to the STXBP/unc-18/SEC1 family (664 aa)
       
 
  0.848
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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