STRINGSTRING
CC1G_00497 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00497" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00497Uncharacterized protein (270 aa)    
Predicted Functional Partners:
CC1G_00179
Vacuolar protein sorting protein 46; Belongs to the SNF7 family (196 aa)
     
 
  0.961
CC1G_00182
HSPC177; Belongs to the SNF7 family (212 aa)
     
 
  0.939
CC1G_13597
Katanin p60 ATPase domain-containing protein; Belongs to the AAA ATPase family (434 aa)
     
 
  0.924
CC1G_03782
SNF7 family protein; Belongs to the SNF7 family (244 aa)
     
 
  0.923
CC1G_00349
Vacuolar sorting protein Vps24; Belongs to the SNF7 family (216 aa)
     
 
  0.913
CC1G_00263
Vacuolar-sorting protein SNF7; Belongs to the SNF7 family (217 aa)
     
 
  0.880
CC1G_01712
Vps20-PA; Belongs to the SNF7 family (140 aa)
           
  0.864
CC1G_01853
Uncharacterized protein (451 aa)
     
 
  0.859
CC1G_14772
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process (218 aa)
     
   
  0.809
CC1G_15579
Vacuolar protein-sorting protein BRO1 (1039 aa)
     
   
  0.784
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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