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CC1G_00505 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00505" - RCC1 domain-containing protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00505RCC1 domain-containing protein (469 aa)    
Predicted Functional Partners:
CC1G_11066
Uncharacterized protein (774 aa)
     
 
  0.962
CC1G_13998
Histone deacetylase-3; Belongs to the histone deacetylase family. HD Type 1 subfamily (504 aa)
     
 
  0.914
CC1G_15232
Uncharacterized protein (2257 aa)
     
 
  0.914
CC1G_10654
Histone deacetylase RPD3 (557 aa)
     
 
  0.842
CC1G_04427
Histone deacetylase Hda1 (590 aa)
     
 
  0.842
CC1G_11763
CDC5 (822 aa)
     
      0.750
CC1G_05302
Histone deacetylase 8 (384 aa)
     
 
  0.738
CC1G_02575
Peptidyl-prolyl cis-trans isomerase B (346 aa)
       
 
  0.713
CC1G_09572
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (162 aa)
       
 
  0.713
CC1G_15539
Uncharacterized protein (1341 aa)
     
      0.709
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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