STRINGSTRING
CC1G_00529 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00529" - Uncharacterized protein in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00529Uncharacterized protein (539 aa)    
Predicted Functional Partners:
CC1G_07075
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (308 aa)
   
 
  0.908
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (422 aa)
   
 
  0.773
CC1G_06861
Topoisomerase I (853 aa)
       
 
  0.759
CC1G_11474
DNA replication helicase dna2 (1482 aa)
     
   
  0.692
CC1G_11031
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1341 aa)
           
  0.621
CC1G_00019
5’-3’ exoribonuclease 2 (1156 aa)
       
 
  0.612
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (585 aa)
     
   
  0.604
CC1G_08656
Gamma DNA-directed DNA polymerase (1341 aa)
   
   
  0.577
CC1G_11756
Coiled-coil domain-containing protein 94 (252 aa)
     
   
  0.553
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
   
 
  0.546
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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