STRINGSTRING
CC1G_00661 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00661" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00661Uncharacterized protein (444 aa)    
Predicted Functional Partners:
CC1G_05633
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (368 aa)
       
 
  0.781
CC1G_08102
Ku70 (559 aa)
       
 
  0.572
CC1G_13640
DNA polymerase; REV3 (1574 aa)
     
 
  0.523
CC1G_14863
Uncharacterized protein (868 aa)
       
 
  0.515
LIG4
DNA ligase 4; Involved in ds DNA break repair. Has a role in non- homologous integration (NHI) pathways where it is required in the final step of non-homologous end-joining; Belongs to the ATP-dependent DNA ligase family (970 aa)
       
 
  0.515
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
     
 
  0.506
CC1G_01985
DNA ligase (833 aa)
     
 
  0.492
CC1G_11289
DNA ligase I (803 aa)
     
 
  0.492
CC1G_08633
Ku80 (855 aa)
           
  0.434
CC1G_01574
Uncharacterized protein (627 aa)
       
 
  0.418
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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