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CC1G_00697 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00697" - Pumilio-family RNA binding repeat protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00697Pumilio-family RNA binding repeat protein (755 aa)    
Predicted Functional Partners:
CC1G_05036
Uncharacterized protein (351 aa)
     
 
  0.765
CC1G_13991
Uncharacterized protein (115 aa)
       
 
  0.684
CC1G_02282
Glucose-repressible alcohol dehydrogenase transcriptional effector (684 aa)
     
 
  0.673
CC1G_10966
rCop c3 (1298 aa)
     
   
  0.667
CC1G_08578
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family (509 aa)
     
 
  0.662
CC1G_05830
Puf family RNA-binding protein (669 aa)
     
 
  0.655
CC1G_06756
Cap binding protein; Belongs to the eukaryotic initiation factor 4E family (301 aa)
       
 
  0.645
CC1G_04407
Class III chitinase; Belongs to the glycosyl hydrolase 18 family (511 aa)
     
      0.632
CC1G_10559
Uncharacterized protein (443 aa)
     
 
  0.627
CC1G_12573
Uncharacterized protein (286 aa)
     
        0.623
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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