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CC1G_11414 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11414" - tRNA-dihydrouridine synthase 1 in Coprinopsis cinerea
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11414tRNA-dihydrouridine synthase 1 (561 aa)    
Predicted Functional Partners:
CC1G_13077
GCD14 (450 aa)
   
   
  0.855
CC1G_04487
RNA methylase (483 aa)
     
   
  0.822
CC1G_00257
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family (599 aa)
     
      0.787
CC1G_02334
Digestive organ expansion factor (657 aa)
     
   
  0.711
CC1G_08666
Rnu3ip2 protein (616 aa)
     
   
  0.706
TRM5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (457 aa)
     
   
  0.696
CC1G_02540
Cystathionine gamma-synthase (680 aa)
   
   
  0.692
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (448 aa)
     
        0.692
CC1G_09822
snoRNA binding protein (463 aa)
     
        0.689
CC1G_11199
Uncharacterized protein (487 aa)
           
  0.687
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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