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CC1G_11144 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11144" - MipD protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11144MipD protein (374 aa)    
Predicted Functional Partners:
CC1G_14404
Transducin family protein/WD-40 repeat family protein (574 aa)
     
   
  0.903
CC1G_11825
Oligoribonuclease (216 aa)
     
 
  0.878
CC1G_06560
Eukaryotic translation initiation factor 3 62 kDa subunit (355 aa)
     
 
  0.759
CC1G_03793
Vacuolar-sorting protein SNF8 (285 aa)
           
  0.738
CC1G_05133
rRNA binding protein (432 aa)
     
 
  0.732
CC1G_06533
Ribosomal processing; RNA-binding domain-containing protein (987 aa)
     
      0.728
CC1G_08643
ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family (671 aa)
     
      0.723
CC1G_08170
Double-stranded RNA binding domain-containing protein-containing protein (435 aa)
     
   
  0.712
CC1G_05311
Protein MAK16; 66S preribosome component MAK16; Belongs to the MAK16 family (319 aa)
     
      0.692
CC1G_14610
Brix domain-containing protein (202 aa)
     
        0.691
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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