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CC1G_04478 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04478" - Transcription regulator in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CC1G_04478Transcription regulator (1441 aa)    
Predicted Functional Partners:
CC1G_03396
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (643 aa)
     
 
  0.947
CC1G_05155
FACT complex subunit SPT16 (1054 aa)
     
 
  0.945
CC1G_15535
Setd1a protein (1614 aa)
     
 
  0.930
CC1G_06966
Uncharacterized protein (571 aa)
     
 
  0.924
CC1G_09124
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily (826 aa)
     
 
  0.890
CC1G_03268
Pol II transcription elongation factor (1053 aa)
     
 
  0.873
CC1G_08634
SNF2-family ATP dependent chromatin remodeling factor snf21 (1471 aa)
     
 
0.870
CC1G_00481
TATA-binding protein associated factor Taf2 (1794 aa)
     
 
  0.856
CC1G_03225
Histone acetyltransferase NGF-1 (629 aa)
     
 
  0.853
CC1G_10334
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1118 aa)
     
 
  0.839
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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