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CC1G_04532 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04532" - pre-mRNA-splicing factor SLU7 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04532pre-mRNA-splicing factor SLU7 (562 aa)    
Predicted Functional Partners:
CC1G_11763
CDC5 (822 aa)
     
 
  0.999
CC1G_10286
pre-mRNA splicing factor (597 aa)
     
 
  0.968
CC1G_13335
pre-mRNA splicing factor (360 aa)
     
 
  0.964
CC1G_12010
pre-mRNA splicing factor (1312 aa)
     
 
  0.964
CC1G_06591
ATP-dependent RNA helicase DHX8 (1160 aa)
     
 
  0.963
CC1G_01164
pre-mRNA-splicing factor SLT11 (330 aa)
       
 
  0.960
CC1G_10325
pre-mRNA-splicing factor SYF2 (402 aa)
     
 
  0.947
CC1G_11756
Coiled-coil domain-containing protein 94 (252 aa)
     
 
  0.945
CC1G_13743
U5 small nuclear ribonucleoprotein component (986 aa)
     
 
  0.945
CC1G_04570
Uncharacterized protein (261 aa)
     
 
  0.942
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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