STRINGSTRING
CC1G_04539 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04539" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04539Uncharacterized protein (312 aa)    
Predicted Functional Partners:
CC1G_07075
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (308 aa)
     
 
  0.974
CC1G_04011
Uncharacterized protein (283 aa)
     
 
  0.956
CC1G_05633
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (368 aa)
     
 
  0.795
CC1G_08248
Metal-dependent phosphohydrolase (693 aa)
           
  0.683
CC1G_09222
Cleavage factor protein (1458 aa)
           
  0.457
CC1G_14587
Uncharacterized protein (762 aa)
     
   
  0.448
CC1G_04383
ATP dependent DNA helicase; Belongs to the MCM family (737 aa)
     
   
  0.437
CC1G_01985
DNA ligase (833 aa)
     
   
  0.410
CC1G_11289
DNA ligase I (803 aa)
     
   
  0.410
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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