STRINGSTRING
CC1G_04547 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04547" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04547Uncharacterized protein (529 aa)    
Predicted Functional Partners:
CC1G_06090
Elongation factor 3 (1058 aa)
     
 
  0.785
CC1G_01993
mRNA export factor elf1 (1089 aa)
     
 
  0.785
CC1G_07665
RNAse L inhibitor-type ATP binding cassette protein (589 aa)
     
 
  0.735
CC1G_11006
ATP-binding cassette (853 aa)
           
  0.643
CC1G_00682
Nod factor export ATP-binding protein I (1618 aa)
       
 
  0.621
CC1G_03722
ATP-dependent transporter (720 aa)
     
 
  0.579
CC1G_14219
Mitochondrial half-size ABC transporter (1138 aa)
     
   
  0.574
CC1G_10539
Mitochondrial 54S ribosomal protein YmL6 (297 aa)
     
 
  0.548
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family (245 aa)
     
 
  0.513
CC1G_15647
Uncharacterized protein (876 aa)
     
 
  0.467
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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