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CC1G_09327 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_09327" - Splicing factor u2af-associated protein 2 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_09327Splicing factor u2af-associated protein 2 (389 aa)    
Predicted Functional Partners:
CC1G_01767
Splicing factor 3a (220 aa)
       
 
  0.957
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
 
  0.910
CC1G_00430
pre-mRNA-processing ATP-dependent RNA helicase PRP5 (1081 aa)
     
 
  0.885
CC1G_09032
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (550 aa)
     
 
  0.841
CC1G_10184
Spliceosome associated protein 145 (599 aa)
     
   
  0.814
CC1G_11933
pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family (748 aa)
     
 
  0.780
CC1G_12010
pre-mRNA splicing factor (1312 aa)
     
   
  0.756
CC1G_03770
ATP-dependent RNA helicase SUB2 (432 aa)
       
 
  0.708
CC1G_04532
pre-mRNA-splicing factor SLU7 (562 aa)
     
   
  0.684
CC1G_10286
pre-mRNA splicing factor (597 aa)
     
   
  0.680
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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