STRINGSTRING
CC1G_09333 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_09333" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_09333Uncharacterized protein (144 aa)    
Predicted Functional Partners:
CC1G_02025
Uncharacterized protein (235 aa)
     
 
  0.966
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
 
  0.916
CC1G_03320
Spo11 (353 aa)
       
 
  0.872
CC1G_13616
Uncharacterized protein (797 aa)
     
 
  0.859
CC1G_01808
Rad51; Belongs to the RecA family (364 aa)
     
 
  0.850
CC1G_03822
Rad51B protein (451 aa)
     
 
  0.790
CC1G_07736
RAD52 DNA repair protein RADC (584 aa)
           
  0.779
MRE11
Double-strand break repair protein MRE11; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand- specific 3’-5’ exonuclease activity. Also involved in meiotic DSB processing (By similarity); Belongs to the MRE11/RAD32 family (735 aa)
           
  0.778
CC1G_01117
ATP-dependent DNA helicase MER3 (1421 aa)
           
  0.736
CC1G_06263
Uncharacterized protein (329 aa)
     
 
  0.733
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (11%) [HD]