STRINGSTRING
CC1G_12090 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12090" - Cyclin binding protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12090Cyclin binding protein (921 aa)    
Predicted Functional Partners:
CC1G_07156
Ubiquitin-protein ligase (824 aa)
     
 
  0.811
CC1G_03837
Ubiquitin-protein ligase (869 aa)
     
 
  0.811
CC1G_05391
Uncharacterized protein (352 aa)
     
 
  0.795
CC1G_02253
Uncharacterized protein (935 aa)
           
  0.681
CC1G_00914
Gamma-adaptin (846 aa)
     
 
  0.626
CC1G_05680
Rho GTPase activator (1343 aa)
     
   
  0.594
CC1G_03919
Crm1-F1 (1077 aa)
     
        0.592
CC1G_09956
Response regulator receiver domain-containing protein (1254 aa)
     
        0.565
CC1G_11892
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1468 aa)
     
        0.564
CC1G_05661
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1700 aa)
     
 
  0.507
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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