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CC1G_12098 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12098" - Polyadenylated RNA binding protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12098Polyadenylated RNA binding protein (574 aa)    
Predicted Functional Partners:
CC1G_04693
transportin-PC (915 aa)
       
 
  0.898
CC1G_10065
Uncharacterized protein (618 aa)
       
 
  0.829
CC1G_06527
Uncharacterized protein (765 aa)
     
 
  0.804
CC1G_14585
Polyadenylate-binding protein 2 (194 aa)
     
 
  0.791
CC1G_03004
Uncharacterized protein (1824 aa)
     
 
  0.731
CC1G_07577
ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family (466 aa)
     
 
  0.718
CC1G_04203
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (681 aa)
       
 
  0.644
CC1G_03580
Uncharacterized protein (862 aa)
       
 
  0.644
CC1G_14612
Uncharacterized protein (322 aa)
     
 
  0.619
CC1G_01109
Uncharacterized protein (279 aa)
     
 
  0.619
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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