STRINGSTRING
CC1G_11825 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11825" - Oligoribonuclease in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11825Oligoribonuclease (216 aa)    
Predicted Functional Partners:
CC1G_00387
Rexo1 protein (516 aa)
     
  0.977
CC1G_02305
Ribonuclease H (636 aa)
     
  0.977
CC1G_11144
MipD protein (374 aa)
     
 
  0.878
CC1G_13950
Exonuclease (849 aa)
       
 
  0.813
CC1G_04250
ATP-dependent peptidase (766 aa)
       
 
  0.813
CC1G_14814
3’ tRNA processing endoribonuclease (946 aa)
           
  0.802
CC1G_00309
Nucleolar protein family A member 2 (153 aa)
     
   
  0.691
CC1G_00866
Phosphoglucomutase; Belongs to the phosphohexose mutase family (583 aa)
 
            0.687
CC1G_07076
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (123 aa)
     
   
  0.657
CC1G_15548
biotin-[acetyl-CoA-carboxylase] ligase (774 aa)
           
  0.655
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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