STRINGSTRING
CC1G_11831 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11831" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11831Uncharacterized protein (229 aa)    
Predicted Functional Partners:
CC1G_06273
RNA binding protein (406 aa)
     
 
  0.936
CC1G_14965
Uncharacterized protein (422 aa)
     
 
  0.901
CC1G_06533
Ribosomal processing; RNA-binding domain-containing protein (987 aa)
     
 
  0.889
CC1G_01146
Ribosome biogenesis protein BRX1 (297 aa)
     
 
  0.862
CC1G_11196
Uncharacterized protein (706 aa)
     
 
  0.851
CC1G_01846
rRNA processing protein RRP1 (316 aa)
     
   
  0.828
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (768 aa)
     
 
  0.766
CC1G_05696
Ribosome biogenesis protein RPF2 (391 aa)
     
 
  0.747
CC1G_08991
Ribosome production factor 1 (456 aa)
     
 
  0.744
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
      0.718
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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