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CC1G_01975 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01975" - SCP160 protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01975SCP160 protein (1238 aa)    
Predicted Functional Partners:
CC1G_07356
Guanine nucleotide binding protein beta subunit (314 aa)
     
 
  0.773
CC1G_12096
Eukaryotic initiation factor 4F subunit P130 (1476 aa)
     
 
  0.756
CC1G_11763
CDC5 (822 aa)
     
      0.730
CC1G_04203
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (681 aa)
     
 
  0.721
CC1G_01067
ATP dependent helicase (1079 aa)
     
      0.706
CC1G_14600
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1726 aa)
     
 
  0.697
CC1G_03157
Protein transporter; Belongs to the SecY/SEC61-alpha family (477 aa)
     
   
  0.693
CC1G_14631
Nuclear segregation protein Bfr1 (515 aa)
     
 
  0.683
CC1G_05784
Vacuolar protein sorting-associated protein 29; Retrograde transporter; Belongs to the VPS29 family (213 aa)
       
 
  0.672
CC1G_09108
Uncharacterized protein; Belongs to the heat shock protein 70 family (884 aa)
     
      0.633
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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