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CC1G_01976 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01976" - SR140 protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01976SR140 protein (688 aa)    
Predicted Functional Partners:
CC1G_01767
Splicing factor 3a (220 aa)
     
 
  0.808
CC1G_11763
CDC5 (822 aa)
     
      0.798
CC1G_04293
DRT111 (630 aa)
     
      0.731
CC1G_14624
Peptide-binding protein (706 aa)
     
        0.686
CC1G_03406
Uncharacterized protein (606 aa)
     
   
  0.633
CC1G_04865
CMGC/DYRK/PRP4 protein kinase (617 aa)
     
        0.596
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
   
  0.517
CC1G_03736
Microfibrillar-associated protein 1 (1095 aa)
     
      0.482
CC1G_00750
Bud site selection protein 16 (361 aa)
           
  0.478
CC1G_08998
pre-mRNA-processing protein prp40 (800 aa)
     
 
  0.473
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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