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CC1G_01985 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01985" - DNA ligase in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01985DNA ligase (833 aa)    
Predicted Functional Partners:
CC1G_05633
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (368 aa)
     
 
  0.944
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (422 aa)
   
 
  0.908
CC1G_08102
Ku70 (559 aa)
     
 
  0.855
CC1G_07347
DNA primase catalytic subunit; Belongs to the eukaryotic-type primase small subunit family (404 aa)
     
 
  0.844
CC1G_11289
DNA ligase I (803 aa)
   
   
0.836
CC1G_05722
DNA polymerase alpha catalytic subunit (1430 aa)
     
 
  0.829
CC1G_08633
Ku80 (855 aa)
     
 
  0.828
CC1G_01532
Thymidylate synthase (319 aa)
     
   
  0.816
CC1G_07657
DNA mismatch repair protein msh6 (1269 aa)
     
   
  0.813
CC1G_07933
DNA ligase (745 aa)
         
    0.800
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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