STRINGSTRING
CC1G_02039 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02039" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02039Uncharacterized protein (457 aa)    
Predicted Functional Partners:
CC1G_04203
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (681 aa)
       
 
  0.606
CC1G_04231
Pumilio (461 aa)
     
 
  0.567
CC1G_02287
Mei4-dependent protein 6 (943 aa)
     
        0.558
CC1G_08578
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family (509 aa)
     
   
  0.458
CC1G_10559
Uncharacterized protein (443 aa)
     
   
  0.435
CC1G_11474
DNA replication helicase dna2 (1482 aa)
     
 
  0.422
CC1G_00697
Pumilio-family RNA binding repeat protein (755 aa)
     
 
  0.417
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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