STRINGSTRING
CC1G_02061 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02061" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02061Uncharacterized protein (582 aa)    
Predicted Functional Partners:
CC1G_07448
DNA helicase (1129 aa)
     
 
  0.920
CC1G_02791
Uncharacterized protein (986 aa)
     
 
  0.908
CC1G_04546
DNA excision repair protein ERCC-1 (356 aa)
     
 
  0.884
CC1G_02333
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (929 aa)
       
 
  0.878
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
     
   
  0.868
CC1G_03320
Spo11 (353 aa)
     
   
  0.845
CC1G_07736
RAD52 DNA repair protein RADC (584 aa)
       
 
  0.815
CC1G_05412
Uncharacterized protein (1149 aa)
     
 
  0.814
CC1G_11289
DNA ligase I (803 aa)
     
   
  0.810
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
   
  0.808
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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