STRINGSTRING
CC1G_06887 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06887" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06887Uncharacterized protein (65 aa)    
Predicted Functional Partners:
CC1G_12576
Uncharacterized protein (77 aa)
     
   
  0.900
CC1G_07074
Uncharacterized protein (769 aa)
       
 
  0.887
CC1G_09391
Uncharacterized protein (501 aa)
       
 
  0.887
CC1G_11596
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagic vesicle formation, mitophagy, and nucleophagy (126 aa)
     
   
  0.763
CC1G_03820
Autophagy-related protein; IDI-7; Belongs to the ATG8 family (127 aa)
     
   
  0.762
CC1G_10286
pre-mRNA splicing factor (597 aa)
       
 
  0.720
URM1
Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2- thiolation reaction by being thiocarboxylated (-COSH) at its C- terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2- thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target [...] (124 aa)
     
   
  0.709
CC1G_01236
Ubiquitin-conjugating enzyme9; Belongs to the ubiquitin-conjugating enzyme family (158 aa)
     
 
  0.701
CC1G_00108
Uncharacterized protein (78 aa)
     
        0.692
CC1G_07289
Uncharacterized protein (2110 aa)
           
  0.688
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (8%) [HD]