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CC1G_03248 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03248" - pH-response regulator protein palC in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03248pH-response regulator protein palC (466 aa)    
Predicted Functional Partners:
CC1G_00263
Vacuolar-sorting protein SNF7; Belongs to the SNF7 family (217 aa)
           
  0.768
CC1G_01794
Transcription factor PacC (771 aa)
           
  0.685
CC1G_06856
tyrosine-tRNA ligase (498 aa)
           
  0.679
CC1G_02632
Tyrosine--tRNA ligase; tyrosyl-tRNA synthetase (456 aa)
           
  0.677
CC1G_04674
Uncharacterized protein; Belongs to the peptidase C2 family (947 aa)
           
  0.675
CC1G_02013
Glucosamine-6-phosphate isomerase (341 aa)
           
  0.648
CC1G_15579
Vacuolar protein-sorting protein BRO1 (1039 aa)
           
  0.513
CC1G_11936
Asparagine synthase (575 aa)
           
  0.512
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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