STRINGSTRING
CC1G_03320 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03320" - Spo11 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03320Spo11 (353 aa)    
Predicted Functional Partners:
CC1G_01808
Rad51; Belongs to the RecA family (364 aa)
     
 
  0.953
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
 
  0.920
CC1G_08126
atypical/PIKK/ATR protein kinase (2345 aa)
       
 
  0.915
CC1G_12428
WD repeat-containing protein 61 (323 aa)
       
 
  0.908
CC1G_15063
Structural maintenance of chromosomes protein (1182 aa)
   
 
  0.905
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
     
 
  0.900
CC1G_06918
Cohesin subunit (1364 aa)
     
 
  0.900
CC1G_00106
Thyroid receptor-interacting protein 13; Belongs to the AAA ATPase family (466 aa)
     
 
  0.898
CC1G_13616
Uncharacterized protein (797 aa)
     
 
  0.891
CC1G_07448
DNA helicase (1129 aa)
     
 
  0.888
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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