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CC1G_02305 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02305" - Ribonuclease H in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02305Ribonuclease H (636 aa)    
Predicted Functional Partners:
CC1G_11825
Oligoribonuclease (216 aa)
     
  0.977
CC1G_00387
Rexo1 protein (516 aa)
       
0.894
CC1G_09166
pre-mRNA-splicing factor CWC22 (890 aa)
     
   
  0.714
CC1G_14814
3’ tRNA processing endoribonuclease (946 aa)
   
   
  0.590
CC1G_06560
Eukaryotic translation initiation factor 3 62 kDa subunit (355 aa)
     
 
  0.552
CC1G_05518
RNA helicase (726 aa)
     
 
  0.542
CC1G_14595
Mitotic control protein dis3; Belongs to the RNR ribonuclease family (1002 aa)
     
 
  0.541
CC1G_05790
RNA helicase (717 aa)
     
 
  0.540
CC1G_10400
ATP-dependent RNA helicase suv3 (846 aa)
           
  0.537
CC1G_10680
Ornithine carbamoyltransferase 1; Belongs to the ATCase/OTCase family (362 aa)
           
  0.526
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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