STRINGSTRING
CC1G_02312 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02312" - lysine-tRNA ligase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02312lysine-tRNA ligase (592 aa)    
Predicted Functional Partners:
CC1G_01078
glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (759 aa)
   
 
  0.985
CC1G_01376
glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (828 aa)
   
 
  0.984
CC1G_03229
isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (1078 aa)
     
 
  0.979
CC1G_05260
proline-tRNA ligase (718 aa)
     
 
  0.977
CC1G_11878
leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (1098 aa)
   
 
  0.970
CC1G_13798
histidine-tRNA ligase (626 aa)
     
 
  0.965
CC1G_07174
arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (615 aa)
   
 
  0.960
CC1G_06322
Methionyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (718 aa)
   
 
  0.960
CC1G_12107
Tars protein (720 aa)
   
 
  0.958
CC1G_02930
Uncharacterized protein (394 aa)
   
 
  0.956
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (8%) [HD]