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CC1G_02315 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02315" - RING-5 domain-containing protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02315RING-5 domain-containing protein (616 aa)    
Predicted Functional Partners:
CC1G_13611
Ring finger protein 14 isoform 2 (445 aa)
           
  0.795
CC1G_08610
60S ribosomal protein L10 (216 aa)
 
   
      0.717
CC1G_00892
Zinc knuckle domain-containing protein (558 aa)
           
  0.661
CC1G_11833
Ubiquitin (305 aa)
       
 
  0.601
CC1G_03676
Ubiquitin C (305 aa)
       
 
  0.601
CC1G_11926
Translation initiation factor eif-2b (738 aa)
 
 
        0.592
CC1G_11074
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family (147 aa)
       
 
  0.571
CC1G_03820
Autophagy-related protein; IDI-7; Belongs to the ATG8 family (127 aa)
     
 
  0.565
CC1G_14580
Ubiquitin activating enzyme (1012 aa)
     
 
  0.550
CC1G_05155
FACT complex subunit SPT16 (1054 aa)
     
   
  0.549
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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