STRINGSTRING
CC1G_03971 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03971" - DNA helicase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03971DNA helicase (940 aa)    
Predicted Functional Partners:
CC1G_14170
Transcription factor (1141 aa)
     
  0.948
CC1G_10331
Uncharacterized protein (602 aa)
     
  0.915
CC1G_00279
Eukaryotic polypeptide chain release factor 3 (576 aa)
     
 
  0.602
CC1G_00894
Serine/threonine-protein kinase TOR; atypical/PIKK/FRAP protein kinase (2380 aa)
     
 
  0.575
CC1G_08323
RNP containing family member (164 aa)
       
 
  0.548
CC1G_02683
Mago nashi domain-containing protein (147 aa)
     
 
  0.535
CC1G_11296
DCP2 (679 aa)
     
 
  0.516
CC1G_03852
Translation release factor (439 aa)
     
 
  0.505
CC1G_09856
Uncharacterized protein (1076 aa)
     
 
  0.499
CC1G_03853
Uncharacterized protein (1218 aa)
     
 
  0.499
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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