STRINGSTRING
CC1G_04002 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04002" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04002Uncharacterized protein (1537 aa)    
Predicted Functional Partners:
CC1G_07289
Uncharacterized protein (2110 aa)
     
 
  0.900
CC1G_03902
Uncharacterized protein (297 aa)
           
  0.819
CC1G_14444
Ubiquitin ligase SCF complex subunit Cullin; Belongs to the cullin family (759 aa)
     
 
  0.761
CC1G_08291
ATP-dependent RNA helicase eIF4A (397 aa)
       
      0.614
CC1G_07802
Uncharacterized protein (353 aa)
     
   
  0.518
CC1G_02375
RCC1 domain-containing protein (549 aa)
           
  0.483
CC1G_03500
Uncharacterized protein (400 aa)
           
  0.475
CC1G_08493
Uncharacterized protein; Belongs to the SKP1 family (128 aa)
           
  0.448
CC1G_10644
Ubiquitin-protein ligase; Belongs to the cullin family (764 aa)
     
 
  0.431
CC1G_03473
Cullin-1; Belongs to the cullin family (764 aa)
     
 
  0.431
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: medium (43%) [HD]