STRINGSTRING
CC1G_00774 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00774" - ZNF1 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00774ZNF1 (886 aa)    
Predicted Functional Partners:
CC1G_07177
Uncharacterized protein (187 aa)
       
 
  0.874
CC1G_14419
Histone acetyltransferase mst2; Belongs to the MYST (SAS/MOZ) family (2272 aa)
     
 
  0.840
CC1G_03192
Histone acetyltransferase ESA1; Belongs to the MYST (SAS/MOZ) family (541 aa)
     
 
  0.786
CC1G_04370
Histone acetyltransferase; Tat-interactive protein; Belongs to the MYST (SAS/MOZ) family (607 aa)
     
 
  0.786
CC1G_05458
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
 
  0.716
XP_001831694.1
Histone H4 (103 aa)
       
 
  0.716
XP_001831685.1
Histone H4 (103 aa)
       
 
  0.716
CC1G_12160
Homoserine O-acetyltransferase (453 aa)
     
        0.678
CC1G_15535
Setd1a protein (1614 aa)
     
 
  0.662
CC1G_10165
Autophagy protein 7 (689 aa)
     
        0.626
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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