STRINGSTRING
CC1G_00814 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00814" - DNA-binding protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00814DNA-binding protein (337 aa)    
Predicted Functional Partners:
CC1G_09879
Valosin-containing protein; Belongs to the AAA ATPase family (816 aa)
     
 
  0.845
CC1G_12759
P47 protein isoform c (350 aa)
     
 
  0.794
CC1G_09900
Uncharacterized protein (652 aa)
       
 
  0.755
CC1G_04184
Ubiquitin fusion degradation protein I (467 aa)
     
 
  0.752
CC1G_13210
NPL4 (660 aa)
     
 
  0.741
CC1G_14861
CbxX/CfqX family protein (2315 aa)
     
 
  0.731
CC1G_03112
AAA family ATPase (789 aa)
     
 
  0.731
CC1G_01377
ATP-dependent Zn protease (645 aa)
     
 
  0.731
CC1G_01210
Phospholipase A-2-activating protein (812 aa)
     
 
  0.712
CC1G_11229
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1745 aa)
       
 
  0.621
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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