STRINGSTRING
CC1G_00835 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00835" - MVP1 domain-containing protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00835MVP1 domain-containing protein (673 aa)    
Predicted Functional Partners:
CC1G_11510
VpsA protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (688 aa)
     
 
  0.877
CC1G_09827
Vacuolar protein sorting 26 (315 aa)
     
 
  0.812
CC1G_14295
Sorting nexin-3 (129 aa)
     
 
  0.801
CC1G_05784
Vacuolar protein sorting-associated protein 29; Retrograde transporter; Belongs to the VPS29 family (213 aa)
     
 
  0.767
CC1G_12185
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (1004 aa)
     
 
  0.753
CC1G_03897
DNA mismatch repair protein MSH3 (1096 aa)
       
      0.748
CC1G_00189
Vacuolar protein sorting-associated protein vps17 (676 aa)
       
 
  0.745
CC1G_02312
lysine-tRNA ligase (592 aa)
       
      0.699
CC1G_04008
Dynamin protein dnm1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (848 aa)
     
 
  0.554
CC1G_06453
Vacuolar H+ ATPase E1 (227 aa)
           
  0.545
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (9%) [HD]