STRINGSTRING
CC1G_00849 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00849" - CCCH zinc finger protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00849CCCH zinc finger protein (442 aa)    
Predicted Functional Partners:
CC1G_14647
Uncharacterized protein (618 aa)
     
 
  0.804
CC1G_10065
Uncharacterized protein (618 aa)
     
 
  0.803
CC1G_08123
Polymerase (595 aa)
     
 
  0.766
CC1G_08650
RRM domain-containing protein (827 aa)
       
 
  0.762
CC1G_14585
Polyadenylate-binding protein 2 (194 aa)
     
 
  0.745
CC1G_09957
Uncharacterized protein (843 aa)
     
 
  0.725
CC1G_03581
Uncharacterized protein (266 aa)
     
 
  0.723
CC1G_09222
Cleavage factor protein (1458 aa)
     
 
  0.716
CC1G_09925
MTR4 (1059 aa)
     
 
  0.696
CC1G_00318
Uncharacterized protein (208 aa)
     
   
  0.666
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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