STRINGSTRING
CC1G_00874 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00874" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00874Uncharacterized protein (703 aa)    
Predicted Functional Partners:
CC1G_02924
Helicase sen1 (1960 aa)
     
 
  0.903
CC1G_14647
Uncharacterized protein (618 aa)
     
 
  0.853
CC1G_15535
Setd1a protein (1614 aa)
       
 
  0.851
CC1G_03878
Cap-binding protein CPB20 (194 aa)
     
 
  0.657
CC1G_09967
Cap binding protein 80-PB (891 aa)
     
 
  0.582
CC1G_00019
5’-3’ exoribonuclease 2 (1156 aa)
     
 
  0.548
CC1G_03024
Uncharacterized protein (423 aa)
       
      0.545
CC1G_11229
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1745 aa)
     
 
  0.540
CC1G_13831
Trf5 (816 aa)
       
 
  0.509
CC1G_07969
PAP associated domain containing 5 (431 aa)
       
 
  0.509
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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