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CC1G_00968 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00968" - RNA polymerase-associated protein LEO1 in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
CC1G_00968RNA polymerase-associated protein LEO1 (611 aa)    
Predicted Functional Partners:
CC1G_03268
Pol II transcription elongation factor (1053 aa)
     
 
  0.986
CC1G_06966
Uncharacterized protein (571 aa)
     
 
  0.984
CC1G_09186
RNA polymerase II accessory factor (422 aa)
     
 
  0.968
CC1G_05716
Uncharacterized protein (424 aa)
     
 
  0.962
CC1G_10334
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1118 aa)
     
 
  0.956
CC1G_12428
WD repeat-containing protein 61 (323 aa)
     
 
  0.941
CC1G_05155
FACT complex subunit SPT16 (1054 aa)
     
 
  0.919
CC1G_03396
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (643 aa)
     
 
  0.912
CC1G_02665
Uncharacterized protein (298 aa)
     
 
  0.856
CC1G_09124
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily (826 aa)
     
 
  0.847
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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