STRINGSTRING
CC1G_08988 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08988" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08988Uncharacterized protein (366 aa)    
Predicted Functional Partners:
CC1G_13915
Microtubule associated protein (2140 aa)
       
      0.731
CC1G_15293
Eukaryotic translation initiation factor SUI1 family protein (616 aa)
     
      0.713
CC1G_14814
3’ tRNA processing endoribonuclease (946 aa)
       
      0.698
CC1G_01357
Nin one binding protein (450 aa)
     
   
  0.639
CC1G_04367
Trm112 (123 aa)
     
   
  0.639
CC1G_05784
Vacuolar protein sorting-associated protein 29; Retrograde transporter; Belongs to the VPS29 family (213 aa)
       
      0.636
CC1G_08362
Cytoplasmic protein (449 aa)
     
   
  0.635
CC1G_10514
Pg4 (192 aa)
     
   
  0.634
CC1G_00363
Uncharacterized protein (382 aa)
     
   
  0.622
CC1G_05185
Transcription regulator (406 aa)
           
  0.621
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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