STRINGSTRING
CC1G_12054 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12054" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12054Uncharacterized protein (494 aa)    
Predicted Functional Partners:
CC1G_03641
Uncharacterized protein (282 aa)
     
 
  0.966
CC1G_05154
Uncharacterized protein (505 aa)
     
 
  0.965
CC1G_09692
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (107 aa)
     
 
  0.949
CC1G_11381
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1403 aa)
     
 
  0.947
CC1G_04588
RNA polymerase subunit (383 aa)
     
 
  0.946
CC1G_02442
Uncharacterized protein (102 aa)
     
 
  0.945
CC1G_11201
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1149 aa)
     
 
  0.942
CC1G_10436
Polymerase III polypeptide H (227 aa)
     
 
  0.939
CC1G_03416
Uncharacterized protein (210 aa)
     
 
  0.938
CC1G_03663
RNA polymerase I (153 aa)
     
 
  0.928
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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