STRINGSTRING
CC1G_13288 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_13288" - Membrane protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_13288Membrane protein (214 aa)    
Predicted Functional Partners:
CC1G_03510
Uncharacterized protein (235 aa)
     
 
  0.991
CC1G_00118
ER-to-Golgi transporter (213 aa)
     
 
  0.941
CC1G_00034
COPII-coated vesicle protein (199 aa)
     
 
0.928
CC1G_04241
phenylalanyl-tRNA synthetase (433 aa)
 
            0.695
CC1G_04984
atypical/RIO/RIO1 protein kinase; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family (590 aa)
 
            0.584
CC1G_09900
Uncharacterized protein (652 aa)
       
 
  0.581
CC1G_01459
Uncharacterized protein (364 aa)
       
      0.564
CC1G_08879
Haloacid dehalogenase-like hydrolase domain-containing protein 2 (322 aa)
     
   
  0.499
CC1G_07282
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (97 aa)
     
        0.440
CC1G_01111
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family (488 aa)
           
  0.426
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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