STRINGSTRING
CC1G_05689 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05689" - Cytoplasmic protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05689Cytoplasmic protein (660 aa)    
Predicted Functional Partners:
CC1G_09879
Valosin-containing protein; Belongs to the AAA ATPase family (816 aa)
       
 
  0.907
CC1G_14872
Ubiquitin-protein ligase (1936 aa)
     
   
  0.868
CC1G_04184
Ubiquitin fusion degradation protein I (467 aa)
           
  0.791
CC1G_01210
Phospholipase A-2-activating protein (812 aa)
     
 
  0.773
CC1G_07146
Ubiquitin conjugation factor E4 (1110 aa)
       
 
  0.753
CC1G_13210
NPL4 (660 aa)
       
 
  0.751
CC1G_04250
ATP-dependent peptidase (766 aa)
       
 
  0.721
CC1G_03355
Transmembrane GTPase fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (874 aa)
           
  0.679
CC1G_11202
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family (174 aa)
     
      0.616
CC1G_01304
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family (362 aa)
     
        0.615
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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