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CC1G_05716 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05716" - Uncharacterized protein in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05716Uncharacterized protein (424 aa)    
Predicted Functional Partners:
CC1G_03268
Pol II transcription elongation factor (1053 aa)
     
 
  0.985
CC1G_00968
RNA polymerase-associated protein LEO1 (611 aa)
     
 
  0.962
CC1G_06966
Uncharacterized protein (571 aa)
     
 
  0.955
CC1G_09186
RNA polymerase II accessory factor (422 aa)
     
 
  0.955
CC1G_03396
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (643 aa)
     
 
  0.828
CC1G_12428
WD repeat-containing protein 61 (323 aa)
       
 
  0.796
CC1G_05155
FACT complex subunit SPT16 (1054 aa)
     
 
  0.794
CC1G_10334
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1118 aa)
     
 
  0.792
CC1G_04967
40S ribosomal protein S19 (158 aa)
           
  0.781
CC1G_04478
Transcription regulator (1441 aa)
     
 
  0.772
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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