STRINGSTRING
CC1G_05720 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05720" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05720Uncharacterized protein (508 aa)    
Predicted Functional Partners:
CC1G_05272
WD repeat-containing protein (755 aa)
     
 
  0.999
CC1G_03774
ROK1; Belongs to the DEAD box helicase family (574 aa)
     
 
  0.998
CC1G_09858
ATP-dependent RNA helicase dbp-4 (816 aa)
     
 
  0.997
CC1G_11196
Uncharacterized protein (706 aa)
     
 
  0.997
CC1G_10546
pre-rRNA-processing protein ESF1 (686 aa)
     
 
  0.996
CC1G_06538
U3 small nucleolar RNA-associated protein (910 aa)
     
 
  0.996
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA-binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1123 aa)
     
 
  0.996
CC1G_04307
Uncharacterized protein (369 aa)
     
 
  0.996
CC1G_05708
ATP-dependent RNA helicase dbp9 (633 aa)
     
 
  0.996
CC1G_05830
Puf family RNA-binding protein (669 aa)
     
 
  0.995
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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