STRINGSTRING
CC1G_12228 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12228" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12228Uncharacterized protein (853 aa)    
Predicted Functional Partners:
CC1G_03887
Phosphatidic acid phosphatase type 2 domain-containing protein 1A (449 aa)
           
  0.779
CC1G_14798
SH3P7r4 (735 aa)
       
 
  0.718
CC1G_01386
Nuclear elongation and deformation protein 1 (1210 aa)
           
  0.691
CC1G_04218
Pseudouridylate synthase 4 (340 aa)
           
  0.622
CC1G_11062
Uncharacterized protein (144 aa)
       
 
  0.428
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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