STRINGSTRING
CC1G_08323 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08323" - RNP containing family member in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08323RNP containing family member (164 aa)    
Predicted Functional Partners:
CC1G_02683
Mago nashi domain-containing protein (147 aa)
     
  0.998
CC1G_00176
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family (396 aa)
     
  0.996
CC1G_00096
Small nuclear riboprotein F (81 aa)
     
 
  0.977
CC1G_13677
Uncharacterized protein (87 aa)
     
 
  0.969
CC1G_01054
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (173 aa)
     
 
  0.968
CC1G_05666
SMB (168 aa)
     
 
  0.966
CC1G_08522
Small nuclear riboprotein Sm-D (136 aa)
     
 
  0.963
CC1G_00108
Uncharacterized protein (78 aa)
     
      0.963
CC1G_04557
Small nuclear ribonucleoprotein Sm D3 (126 aa)
     
 
  0.962
CC1G_03667
pre-mRNA splicing factor (130 aa)
     
 
  0.942
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (11%) [HD]