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CC1G_05939 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05939" - DNA-(apurinic or apyrimidinic site) lyase 2 in Coprinopsis cinerea
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CC1G_05939DNA-(apurinic or apyrimidinic site) lyase 2 (609 aa)    
Predicted Functional Partners:
CC1G_13815
Endonuclease IV (320 aa)
     
  0.977
NTH1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family (450 aa)
 
 
 
  0.903
CC1G_10278
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family (127 aa)
           
  0.852
CC1G_01194
N-glycosylase/DNA lyase (409 aa)
   
 
  0.847
CC1G_01133
DNA-(apurinic or apyrimidinic site) lyase (304 aa)
         
0.838
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (422 aa)
     
 
  0.827
UNG1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (329 aa)
   
 
  0.826
CC1G_02791
Uncharacterized protein (986 aa)
     
 
  0.798
CC1G_15688
A/G-specific adenine DNA glycosylase (599 aa)
     
 
  0.796
CC1G_05202
Polynucleotide kinase 3’-phosphatase (457 aa)
   
 
  0.778
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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